Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIAD------ICQTGFL--EGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEL-DI--E-VEIYEG---DFEDI-QEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
| 4CHG Chain:A ((2-132)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------MIVDTSVWIAYLSTSESLASRWLA-DRIAADSTVIVPEVVMMELLIGKTDEDT--AALRRRLLQRFAIEPLAPVRDAEDAAAIHRRCRRGGDTVRSLIDCQVAAMALRIGVAVAHRDRDYEAIRTHCGLRTEPL--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57769 for 859 contacts (-67.3/contact) +
2D Compatibility (PS) -12052 + (NN) -2779 + (LL) 21012
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -54938.0 ( -63.96 by residue)
QMean score : 0.362
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