Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
5B8F Chain:A ((8-162))
-MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLM--
General information:
TITO was launched using:
RESULT:
Template:
5B8F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110574 for 1302 contacts (-84.9/contact) +
2D Compatibility (PS) -16939 + (NN) -10316 + (LL) 100
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -156079.0 ( -119.88 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_5B8F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5B8F-query.scw
PDB file :
Tito_Scwrl_5B8F.pdb
: