Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
1ZIP Chain:A ((1-217))
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR
General information:
TITO was launched using:
RESULT:
Template:
1ZIP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93767 for 1676 contacts (-55.9/contact) +
2D Compatibility (PS) -23929 + (NN) -17832 + (LL) 0
1D Compatibility (HY) -29200 + (ID) 8100
Total energy: -172828.0 ( -103.12 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1ZIP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZIP-query.scw
PDB file :
Tito_Scwrl_1ZIP.pdb
: