Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNI-GKTEFILLLVVGILT-IINVLTAD--GEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
4L0J Chain:A ((123-176))
-PGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV-RISSLD-SSWSLF---------------------
General information:
TITO was launched using:
RESULT:
Template:
4L0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20397 for 268 contacts (-76.1/contact) +
2D Compatibility (PS) -5353 + (NN) 623 + (LL) 1404
1D Compatibility (HY) 1200 + (ID) 250
Total energy: -22773.0 ( -84.97 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_4L0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L0J-query.scw
PDB file :
Tito_Scwrl_4L0J.pdb
: