Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVR------PTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGE---REYVF------GK-GGGDKLAEE-----LNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV
3R9J Chain:A ((4-246))-----------------------------------------------------------------------------------------------------------IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDK-RTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGAL--MALYFADEAIITTNPEVS-----------SVRDSDRILGILAS---------GEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERL--------


General information:
TITO was launched using:
RESULT:

Template: 3R9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124220 for 1703 contacts (-72.9/contact) +
2D Compatibility (PS) -22497 + (NN) -4661 + (LL) 11908
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -151620.0 ( -89.03 by residue)
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_3R9J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9J-query.scw
PDB file : Tito_Scwrl_3R9J.pdb: