Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVR------PTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGE---REYVF------GK-GGGDKLAEE-----LNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
3R9J Chain:A ((4-246)) | -----------------------------------------------------------------------------------------------------------IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDK-RTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGAL--MALYFADEAIITTNPEVS-----------SVRDSDRILGILAS---------GEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124220 for 1703 contacts (-72.9/contact) +
2D Compatibility (PS) -22497 + (NN) -4661 + (LL) 11908
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -151620.0 ( -89.03 by residue)
QMean score : 0.406
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