Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLLT----PTSVVLGVLLSQFLNGYEWA--VP-WIFAFITFAGSLSANFQSLRHALSHPLPMILALF-VLHIFMPLFAWGSGHLIFKG-----DPLTITGLTLAVVIP--TGITSLIWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFG------YMLNRFELKPMLQKA |
| 4A1N Chain:A ((19-311)) | KAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHIS--KSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQT-RGDGKKIVSYQVIGEDN-----VAVPSHLYKVILARRSSVST----------EPLALGAFVVPN--------EAIGFQPQLTEFQVSLQDLEKLSGLVFFPHL--DRTSDIRNICSVDTCKLLD---FQEFTLYLSTRKIEGSV-LRLEKIMVNLKNEIEPDDYFMSRYEKKL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -249039 for 1874 contacts (-132.9/contact) +
2D Compatibility (PS) -26625 + (NN) 6802 + (LL) 3204
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -273208.0 ( -145.79 by residue)
QMean score : 0.096
|
|
|