Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY
4MCJ Chain:A ((81-123))-------------------------------------------------------------------------------------------------------------------------------ELEHLEKADLIIMNILA----SSKSPITLLEMGLFMR-SGKLRVICEP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24040 for 212 contacts (-113.4/contact) +
2D Compatibility (PS) -4827 + (NN) -2036 + (LL) 19508
1D Compatibility (HY) -400 + (ID) 300
Total energy: -12095.0 ( -57.05 by residue)
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_4MCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MCJ-query.scw
PDB file : Tito_Scwrl_4MCJ.pdb: