Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGGFSTPREPAEIIGGTGEDVLNGTAKIVTASGEDVTELYM--EGAAKTLAYAKEINASAVILKENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQAGYRVISENELNDIL------- |
2KHZ Chain:A ((1-163)) | MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 681 for 1151 contacts (0.6/contact) +
2D Compatibility (PS) -16099 + (NN) -6144 + (LL) 0
1D Compatibility (HY) -400 + (ID) 700
Total energy: -22662.0 ( -19.69 by residue)
QMean score : 0.306
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