Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVSLSLSSLLTLFF-IMLMASGISGLLFLHP--RVPLSFVRIHIGILALPLLVSLLILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISGRLFLLSWFSLFFAMMWLFHATGQWQLSLVVTNESLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAG--GIILTRFSPLFHGGIASIILLLLASISVLIGTGISLVQVDYKRQLVGSTI-GQMGFMLIQCALGAYIAAIIHLILHGLFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWLTAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGR-----IAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVMIVV--------CLLLFGSALGTWVARHRSSVFFAVLYLW-----LVRLGEAKPKSVESHPDYLKQYIS---------- |
| 4OPU Chain:A ((2-453)) | ---------MKELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNR--------IGDKPCGDAVSKAHFDKL------------------GMPYPKGEELENKIN----------GIKLYSPD---MQTVWTVNHEGFELNAPLYNQ-RVLKEAQDRGVEIWDL-------TTAMKPIFEDGYVKGAVLFNR---------RTNEELTVYSKVVVEATG--YSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHD-----YLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAP----DVDKSKLLVK-----GGALVPTR---RPLYTMAWNG---IIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -430953 for 3548 contacts (-121.5/contact) +
2D Compatibility (PS) -42619 + (NN) 2508 + (LL) 8420
1D Compatibility (HY) -9200 + (ID) 3900
Total energy: -475744.0 ( -134.09 by residue)
QMean score : 0.292
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