Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYEEVEETHSGNVRFLHVHSMMEENMLSKMIVVTRNGKTDLDIEGVYEGYVVREY
5DYN Chain:A ((79-114))
----------ETIENYPEQNSADANVMKKVISTAFNQYKAEKYGMV--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5DYN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3636 for 143 contacts (-25.4/contact) +
2D Compatibility (PS) -3640 + (NN) -802 + (LL) 4572
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -6406.0 ( -44.80 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_5DYN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DYN-query.scw
PDB file :
Tito_Scwrl_5DYN.pdb
: