Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVI--QKVDLVIMDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIG-EDYMVKPFDPRELLLRMRNMLEHHYGTFTQIKHLYIDAVTKKVFNESLHDEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKKIRAKINDQAGEMIENIYGEGYRLNTVVKK
1NXV Chain:A ((3-119))
----KILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93328 for 894 contacts (-104.4/contact) +
2D Compatibility (PS) -12727 + (NN) -9963 + (LL) 8996
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -119472.0 ( -133.64 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1NXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXV-query.scw
PDB file :
Tito_Scwrl_1NXV.pdb
: