Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTG--NMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLI---------MTSEN-NEWSRALVN---SSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 2DHH Chain:A ((29-201)) | ------------------------------------------------------------------------------------------------KLPVAQYPTIAPPAVTISASYPGADAKTVQDTV-TQVIEQNMNGIDNLMYMSSNSD----STGTVQITLTFE---------SGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIW------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12522 for 913 contacts (13.7/contact) +
2D Compatibility (PS) -15145 + (NN) -4234 + (LL) 9748
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -4209.0 ( -4.61 by residue)
QMean score : 0.133
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