Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLDDNEMSFLNHVLEKEIKYAQNEQDQKRAKELNEVYELLL
5BZV Chain:A ((231-296))
------YLLAELFNRLSNELCQLSCLKFSSNVV---EKFIKKL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5BZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8195 for 162 contacts (-50.6/contact) +
2D Compatibility (PS) -3563 + (NN) -1606 + (LL) 3916
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -14198.0 ( -87.64 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_5BZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BZV-query.scw
PDB file :
Tito_Scwrl_5BZV.pdb
: