Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEF--NGEYPDHDLIEELVNHYCFEHEI
2OJL Chain:A ((48-85))
------------------GTGGVFRIHYNGAPL----WDREVDGGFPEAKVLKQRVRDHL-----
General information:
TITO was launched using:
RESULT:
Template:
2OJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18705 for 171 contacts (-109.4/contact) +
2D Compatibility (PS) -4006 + (NN) -2454 + (LL) 2340
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -24675.0 ( -144.30 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2OJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OJL-query.scw
PDB file :
Tito_Scwrl_2OJL.pdb
: