Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNKQLKKKAQEIGNVPTHYELEIEDYDQKQKKYGQAYFIWKDPKDPEKHITVELRNDGALLTFSTTVHSETDKKLPDAELKLTALQFAAANHPGTFMNFHFQGKEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQIVHFLYYGEGHKAEVPTEFVAKEKVVSHYLNTMSFELMYDVIDGEQEPRLVYEPILPGYSYPADVDEIVPDQHIADERIENTAPLPPLQNKEEVDIFALLGFTSDMQKVSERDFGEQIGSTWRRGAAPERKDLSIGSYFETRNKNTIKMKTDKRTGKLKAALSFMD-W------------RNNLQCSTEECQEIALQFLYALYPRAAEFFRVNPVRIDERGR-VRNHFSVWYKGVPLRFGAARIIVNPETGLIDAFMAPDIEPEQLEAINHRPDVSAEEAKEAFLAAFDVKLEWQPDFTAGSDQHCKLVYKPVYPSYIDAHIRKKKRL
4EXR Chain:A ((59-172))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNKFVYTVEG------------VDD--NNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQN----GIVKEWSLDKD---LDVTFYKIRIDKD-------KNEYDIKVDSKKGTVLKVEK----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 345 -8478 -24.57 -84.78
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -24.57
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_4EXR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EXR-query.scw
PDB file : Tito_Scwrl_4EXR.pdb: