Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYGIYMDRPLSQEENERFMSFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLDKSDIRFSTQEYGKPCIPDLPDAHFNISHSGRWVICAFDS----QPIGIDIEKTKPISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEG--KGLSLPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELL
4QVH Chain:A ((399-553))------------------PPGLTPLPEEAPLIARSV-AKRRNEFITVRHCARIALDQL-GVP--PAPILKGDKGEPCWPD--GMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTM-PAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFET--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 571 -46767 -81.90 -313.87
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -81.90
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_4QVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QVH-query.scw
PDB file : Tito_Scwrl_4QVH.pdb: