Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQTWPFLHNAQSFIQENWNASGFQKPTPVQEQAAQLIMDG--KDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKK-HPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTL---RDRQLLCFSATLKKETEDVLRELAQEPEVLKVQRSKAEAGKVKHQYLIC-DQRDKVKLLQKLSRLEGM-QALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIIATFEDGEFPLLLATDIAARGLDIENLPYVIHADIP-------DEDGYVHRSGRTGRAGKEGNVLSLVTKLEESKLKKMAKKLGVELSEAVYAGGKLKTK
3RRN Chain:A ((22-353))--------------------AMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKI-TSQLI----VPDSFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNML--DQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQ------DAIKQLYMDCKNEADKFDVLTELYGVMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFV--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1621 -196827 -121.42 -632.88
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -121.42
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3RRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RRN-query.scw
PDB file : Tito_Scwrl_3RRN.pdb: