Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGYLVLEDGTSFSGELDGHENCTGEAVFFTGMTGYQEVLTDPSYKGQIIVFTYPLIGNYGINEKDFESKKPQVKAAVVYEACDHFSHYEAVYSLKEYLQKWNIPLLTHVDTRAVVKKIRANGTMGATVTASKEGAEIALQPENVAEQASAQEISTFGDGNKH-IALIDFG--YKKSIASSLVKRGCKVTVVPYQQMEA-VYNIKPDGIVLSNGP------GDPKAIQPYLGKIKSIISRFPTLGICLGHQLIALAFGGNTFKLPFGHRGANHPVIDRKTKRVFMTSQNHSYVVDEQSINEEELTIRFHHVNDTSVEGLAHKKLPVMSVQFHPEAHPGPAESEWIFDDYLKNVIPARREIAHA
1GPM Chain:A ((6-122))----------------------------------------------------------------------------------------------------------------------------------------------------------------HKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQ-YVFE-----AGVPVFGVCYGMQTMAMQLGGHV------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 359 -59272 -165.10 -697.31
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -165.10
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_1GPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GPM-query.scw
PDB file : Tito_Scwrl_1GPM.pdb: