Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MEHDYLISLLVIVGI--------------DLILGGDNAVVIAMASRHLPDKQRQQA-------IILGTFI----AVAMRIGLTSAAVYLLNIPFLQCAGG---IFLLY--LGYQLLIE-KKDTKHIKSSTSLWRAIRTIV-----------LADLFMSLDNVIAVAGASHGEFSLVVIGLC-VSVPVIIW---GSKLIHIALEKIP--------------------LLIYAGSGLLAY-TGGEMIVRDKKLSLFMAQHGTVETLLPILTVAFVILASIYYQQVEK---------------
4PE6 Chain:A ((18-339))KPFIALSNGFIGNGWRQTMIAKFEEAAKQAQADGLIGKYKVVNAPGNNSATEQVAQIKSLLLQKPDALLINPASPTALQPVIQQACDAGVKVVVFDSAIDAPCAYILQNSFVDWATYAAK-PVLESIGGKGNVIVVRGVVGSQPEAEMYETTKKILAEYPQVKTVATVTGMCDGATAQKAVLGVLPSVSTVDAVIGCGDGYGVAQAFATAGKPIPAVTFETNGRALSYWKDNKIDNGSVAVMSDPAQSVAALWAALDLLEGRDLPKQMTFPIVLIEEKDRDTWASV------LKPDEYAAWPWTRELFRQQVEAIKTGGEPVQPPIPST


General information:
TITO was launched using:
RESULT:

Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 772 -157883 -204.51 -748.26
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -204.51
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.150

(partial model without unconserved sides chains):
PDB file : Tito_4PE6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PE6-query.scw
PDB file : Tito_Scwrl_4PE6.pdb: