Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAQTDYKKQVVGILLSLAFVLFVFSFS-ERHEKPLVEGKKQENWHTVVDKASV----------KIYGSRLVEENKLKQKLGH----------KQADSILTLLKLANEKHITL-
2NMM Chain:A ((12-131))-AVADLALIPDVDIDSDGVFKYVLIRVHSAPESKEIVRGYKWAEYHADIYDKVSGDMQKQGCDCECLGGGRISHQSQDKKIHVYGYSMAYGPAQHAISTEKIKAKYPDYEVTWA


General information:
TITO was launched using:
RESULT:

Template: 2NMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 399 -28536 -71.52 -313.58
target 2D structure prediction score : 0.34
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -71.52
2D Compatibility (Sec. Struct. Predict.) : 0.34
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.160

(partial model without unconserved sides chains):
PDB file : Tito_2NMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NMM-query.scw
PDB file : Tito_Scwrl_2NMM.pdb: