Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVFTGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFI----KDKKLEHQLETKMTSEGLLITIKDS---IFFDSGKATIRKEDVPLAKEISNLLVINP-----PRNIIISGHTDNMPIKNSE-FQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRGAAETNEK
2ZVY Chain:A ((99-273))----------------------------------------------------------------------------------------EKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSAEVE----PYMRDI--LRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQAEQA---


General information:
TITO was launched using:
RESULT:

Template: 2ZVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 712 -44059 -61.88 -271.97
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -61.88
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2ZVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZVY-query.scw
PDB file : Tito_Scwrl_2ZVY.pdb: