Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTRKESELEGVTLLGNQGTNYLFEYAPDVLESFPNKHVNRDYFVKFNCPEFTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGKPGTKYEKMAEYRMMNHDLYPETIDNR
4FGC Chain:C ((21-165))--------------------NYLFEYAPDVLESFPNKHVNRDYFVKFNCPEFTSLAPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGKPGTKYEKMAEYRMMNHDLYPETIDNR


General information:
TITO was launched using:
RESULT:

Template: 4FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 612 -72929 -119.17 -502.96
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.95

3D Compatibility (PKB) : -119.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_4FGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FGC-query.scw
PDB file : Tito_Scwrl_4FGC.pdb: