Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMERFEITKTPINTENIIKKVEKREAGAITTFIGTVREWTNGKRTVRLEYEAYEPMAVQMLAQIGAEIEEKWEGASAAITHRIGVLDIGEAAVVIAVSSPHRKAAYEANEYAIERIKQIVPIWKKEIWEDGEQWIGDQLETTAYPNGKPDLSEGEQHD
4AP8 Chain:C ((31-134))------------------------CGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYE-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 439 -65613 -149.46 -630.89
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -149.46
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_4AP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AP8-query.scw
PDB file : Tito_Scwrl_4AP8.pdb: