Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------MHMSFDGMFTYG-MTHELNEKIMGGRITKIHQPYKHDVI------------------------FHIRAKGKNQKLLLSAHPSYSRVHI------------TAQAYE--NPSEPPMFCMLLRKHIEGGFIEKIEQAGLDR----------IMIFHIKSRNEIGDETVRKLYVEIMGRHSNIILTDAAENVIIDGLK----------HLSPSMNSYRTVLPGQDYKLPPAQDKISPLEASEDDILRHLSFQEGRLDKQIVDHFSGVSPLFAKEAVHRA--------------------GLANKVTLPKALLALFAEVKEHRFIP---NITTVNGKEY------FYLLELTHLKGEARRFDSLSELLDRFYFGKAERDRVKQQAQDLE--------RFVVN----ERKKNANKIKKLEKTLEYS--ENAKEFQLYG-----ELLTANLYMLKKGDKQAEVINYYDEESPTITIPLNPNKTPSENAQAYFTKYQKAKNS----------------VAVVEEQIRLAQEEIEYFDQLIQQLSSASPRDISEIREELVEGKYLRPKQQKGQKKQKPHNPVLETYESTSGLT----ILVGKNN--RQNEYLTTRVAARDDIWLHTKDIPGSHVVIRSSEPDEQTI------MEAATIAAYFSKAKDSSSVPVDYTKIRHVKKPNG----AKPGFVTYDSQHTVFVTPDADTVIKLKKS
4XR7 Chain:A ((340-1097))MLAYPDYFNDITSDGPISVDDETYPLSSVGMPYYLDKLLSAWPPVVFKSEGTIPQLLAVISSQNEKLSTQEFPLLRYDRTKYGMRNAIPDYVCLRDIRKQITSGLETSDIQTYTSINKYEVPPAYSRLPLTFDFTPFNNTEYSGLDPDVDNHYTNAIIQLYRFI--PEMFNFVVGCLKDE---NFETTLLTDLG--YLFDMMERSHGKICSSSNFQASLKSLTDKLESLCIRESIEDSSESIKRNMPQKFNRFLLSQLIKEEAQTVNHNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINKQNILPYIEYAMKNVTQKNSICPTCGKTETITQECTVKNLPSVLSLELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTASELKGTSHIFKYELNGYVAKITDNNNETRLVTYVKKYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKTPEIIIYCD--AEELRKPFFSVDTYSINYDILFRDYFANARREYKLLTHDEAPKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPK-------RTALARISIIRGEEGELYGVPFVDDYVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQL--GCVFVGHGLNNDFKHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGNHDSIEDAHTALILYKKYLHLKEKAIFEKVLNS


General information:
TITO was launched using:
RESULT:

Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2190 -77478 -35.38 -139.85
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -35.38
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.078

(partial model without unconserved sides chains):
PDB file : Tito_4XR7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XR7-query.scw
PDB file : Tito_Scwrl_4XR7.pdb: