Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELNKTKVRKELRTERPSIYSFELDEIKQWLTDNGEKPFRAAQIFEWLY--EKRVSSFE---DMTNLSKDLREKLNTRFVL-------TTLKTAVKQTSQDGTMKFLFELHDGYT----------IETV-------LMRHEYGNSVCVTTQVGCRIGCTFCASTLGG--LKRNLEAGEIVAQVVKVQKALDETDERVSSVVIMGIGEPFDNF-NEMLAFLKIINHDKGLNIGARHITVSTSGIIP-----KIYEFADQQMQINFAISLHAPNTEIRSRLMPINRAYKLPDLMEAVKYYINKTGRRISFEYGLFGGVNDQVEHAEELADLLEGVKC-HVNLIPVNYVPERDYVRTPRDQIFAFEKTLKSRGVNVTIRREQGHDIDAACGQLRAKERQDETR
2A5H Chain:A ((10-316))-------------------------------------KDVSDADWNDWRWQVRNRIETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAIPTALELNKAAADLEDPLHEDTDSPVPGLTHRYP--DRVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNT-----PQVRDVLLSG-GDALLVSDETLEYIIAKLRE-IP-HVEIVRIGSRTPVVLPQRITPELVNMLKKYHPVWLNTHFNHPNEIT-------------EESTRACQLLAD-AGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLR---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1292 -146194 -113.15 -543.47
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -113.15
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_2A5H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A5H-query.scw
PDB file : Tito_Scwrl_2A5H.pdb: