Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEY--SRFNEDGSLDPFIIEMKKRDLYEIVHSVLPDFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHCIT----------EDKVVDNDE---------------------LQEFHDISKSLKQ-----------QDSQSDLKDIVSCVAAFNGY----TYEEISEMTMYQLYLS----FYRMAEVMNYNTTTLFATVSPDVK--VSDWSSHINLYKEESYHLSTKDAKNIEQLFGG--
2GT1 Chain:A ((1-323))MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAKNYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQ-----QHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA


General information:
TITO was launched using:
RESULT:

Template: 2GT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1016 37148 36.56 160.81
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 36.56
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_2GT1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GT1-query.scw
PDB file : Tito_Scwrl_2GT1.pdb: