Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMDITQYLSTQGPFAVLFCWLLFYVMKTSKERESKLYNQIDSQNEVLGKFSEKYDVVIEKLDKIEQNFK
1MQM Chain:B ((50-84))----------------------------------RKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYV-


General information:
TITO was launched using:
RESULT:

Template: 1MQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 20 2354 117.68 67.24
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : 117.68
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_1MQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MQM-query.scw
PDB file : Tito_Scwrl_1MQM.pdb: