Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAVSPIRRFTVDGVNVYYEHYQNPGR-QTLVCVHGFLSSAFS----FRKVIPLLRDKYDIIALDLPPFGQSE-----KSRTFIYTYQNLAKLVIGILEHLQVKQAVLVGHSMGGQISLSAALQKPELFSKVVLLCSSGYLKRSH-PTIIFGTHIPYFHLYIKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLE----PEQLKKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSVLYSLGQTGHLVPEERPELISEHIADFIK
2OG1 Chain:A ((8-284))--STSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVN-----ARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKL-LFKLYAEP--SYETLKQMLQVFLYDQSLITEELLQGRWEAIQ-RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLR


General information:
TITO was launched using:
RESULT:

Template: 2OG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1586 -26268 -16.56 -100.26
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -16.56
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_2OG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OG1-query.scw
PDB file : Tito_Scwrl_2OG1.pdb: