Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MVTKILKAPDGSPSDVERIKKESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLVMDDLSQKYGN-GTLKLTTRETFQMHGILKWNMKKTIQTIHSALLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTPEEEVEPMYGPLYLPRKFKIGIAVPPSNDI--DVFSQDLGFIAIVEDGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQMYDVAEKTITIQRDYGNRSVRKNARFKYTVDRLGLENVKEELENRLGWS-LEEAKPYHFDHNG----DRYGWVEGIEDKWHFT-LFVEGGRITDYDDYKLMTGLREIAKVH-TGEFRLTANQNLMIANVSSDKKEEISALIEQYGL-TDGKHYSALRRSSMACVALPTCGLAMAEAE-RYLPTLLDKIEEIIDENGLRDQEITIRMTGCPNGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEADILSELRILLSRYAKEREEGEHFGDFVIRAGIIKATTDGTNFHD 3VKP Chain:A ((134-526)) ----------------------------------------------------------------------------RFMMRLKLPNGVTTSAQTRYLASVIRKYGKEGCADITTRQNWQIRGVVLPDVPEILKGLAEVGLTSLQSGMDNVRNPV--GNPLAGIDPEEIV--------DTRPYTNLLSQFITGNSR--GNPAVS--------NLPRKWNPCVVG--SHDLYEHPHINDLAYMPATKDGRF-GFNLLVGGFFSAKRCDEAI-----PLDAWVPADDVVPVCRAILEAFRDLGFRGNRQKCRMMWLIDELGVEGFRAEVEKRMPQQQLERASPEDLVQKQWERRDYLGVHPQKQEGYSFIGLHIPVGRVQADD----MDELARLADEYGSGEIRLTVEQNIIIPNIETSK---IEALLKEPVLSTFSPDPPILMKGLVACTGNQFCGQAIIETKARSL-----KITEEVQRQVSLTKPVRMHWTGCPNTCAQVQVADIGFMG--------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 3VKP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2203 26083 11.84 68.46 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain A : 0.71 3D Compatibility (PKB) : 11.84 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.349

(partial model without unconserved sides chains): PDB file : Tito_3VKP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VKP-query.scw PDB file : Tito_Scwrl_3VKP.pdb: