Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQSNIWLYFFGALGGALYGYDTGVISGAI------LFMKKELGLNAFTE--GLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVA--------LAPNTGV----------MVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSYIVNYIFA--------DAEAWRWMLGLAAVPSLLLLIGILFMPESPRWLFTNGEESKAKKILEKLRGTKDIDQEIHDIKEA--EKQDEGGLKELFDPWVRPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGFGNSASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAASWTTVICLGVFIVVFAVSWGPVVWVMLPELFPLHVRGIGTGVSTLMLHVGTLIVSLTYPI-----LMEAIGISYLFLIYAAIGIMAFLFVRFKVTETKGRSLEEIEQDLRDKNGQGGAAGKQQTVGT
4JA3 Chain:B ((19-471))--------------LGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGR-----------GV---IVIGVMLSIFQQFVGINVVLYYAPEV------STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGM--FSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI---ALAIAVAAQWLANYFVSWTFPMMDKNS-----HNGFSYWIYGCMGVLAALFMWKFVPETKGKTL-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1913 -192681 -100.72 -499.17
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -100.72
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_4JA3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JA3-query.scw
PDB file : Tito_Scwrl_4JA3.pdb: