Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPDALSPR-VTAGLETVAIRMPDHPLALALIRESGLPIAAPSANLSGKPS-PTKAEHVAHDLDGRIAGIVDGGPTGIGVESTVLSCADDIPVLLRPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAICEGSPERIQHLIQEYQQGGRRVGVLTTEEKAGVYSADYVKSCGRRAQLETVAAGLYDALRSFDENKVDFIIAESFPDTGVGLAIMNRLMKAAGGRVIR
1K7J Chain:A ((12-205))---------------PQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF-VDNVAFRLMKNNTPGNYTFILKGT-KEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGY-LGQKPTTVIDLTDDTPVVVREGVGDVKPF----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1041 -53498 -51.39 -278.64
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -51.39
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_1K7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K7J-query.scw
PDB file : Tito_Scwrl_1K7J.pdb: