Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPYLKRVLLLLVTGLFMSLFAVTATASAQTGGSFFDPFNGYNSGFWQKADGYSNGNMFNCTWRANNVSMTSLGEMRLALTSPAYNKFDCGENRSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPT---DGTPWDEIDIEFLGKDTTKVQFNYYTNGAGNH---EKIVDLGFDAANAYHTYAFDWQPNSIKWYVDGQ-LKHTATNQIPTTPGK--IMMNLWNGTGVDEWLGSYNGVN-PLYAHYDWVRYTKK
3HR9 Chain:A ((5-168))--------------------------------------------------------------------------------------FSGAELYTLEEVQYGKFEARMKMAAASGTVSSMILYQNGSEIADGRPWVEVDIEVLGKNPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQVSNLTGTQGLRFNLWSSESA-AWVGQFDESKLPLFQFINWVKVYK-


General information:
TITO was launched using:
RESULT:

Template: 3HR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 787 14556 18.50 94.52
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 18.50
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_3HR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HR9-query.scw
PDB file : Tito_Scwrl_3HR9.pdb: