Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKCNKMNRVQLKEGSVSMTL
1YSH Chain:D ((38-52))-FCEFCGKFAVKRKAV----


General information:
TITO was launched using:
RESULT:

Template: 1YSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 11 -1110 -100.91 -74.00
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : -100.91
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_1YSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YSH-query.scw
PDB file : Tito_Scwrl_1YSH.pdb: