Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
3DL8 Chain:E ((8-24)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFVIIAVVLIISTLLQK-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8914 for 64 contacts (-139.3/contact) +
2D Compatibility (PS) -1884 + (NN) -2366 + (LL) 9656
1D Compatibility (HY) -2800 + (ID) 100
Total energy: -6408.0 ( -100.12 by residue)
QMean score : 0.171
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