Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
4DRB Chain:C ((675-790))
KKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQTTGIHQLS--------LSEWRLWQDHPL--------------PTHQVDHS-------DRCRHFIGLMQMIEGMRHEEG--------------ECSYELEVESYLQMEDV
General information:
TITO was launched using:
RESULT:
Template:
4DRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -441 for 420 contacts (-1.1/contact) +
2D Compatibility (PS) -10376 + (NN) -408 + (LL) 3436
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -11039.0 ( -26.28 by residue)
QMean score : -0.143
(partial model without unconserved sides chains):
PDB file :
Tito_4DRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DRB-query.scw
PDB file :
Tito_Scwrl_4DRB.pdb
: