Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
1FE6 Chain:A ((1-52)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------GSIINETADDIVYRL------TVIIDDRYESLKNLITLRADRLEMIINDNVSTILASG---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -233 for 205 contacts (-1.1/contact) +
2D Compatibility (PS) -5358 + (NN) 1064 + (LL) 10036
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 909.0 ( 4.43 by residue)
QMean score : -0.387
|
|
|