Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------MITRYKPESGFVARSGGPDRKRPHDWIVWHFTHADNLPGIITAGRLLADSAVTPTTEVAYNPVKELRRHKVVAPDSRYPASMAS------DHVPFYIAARSPMLYVVCKGHSGYSGGAGP-----LVHLGVALGDIIDADLTWCAS---DGNAAASYTKFSRQVDTLGTFVDFDLLCQRQWHNTDDDPNRQSRRAAEILVYGH---------VPFELVSYVCCYN---TETMTRVRTLLDPVGGVRKYVIKPGMYY-------------- |
4PW8 Chain:A ((26-367)) | IYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETM----TALDFNDFREYLSPASGFQSLQFRLLENKIGVLQEENELLLKSEQEKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFD----EKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRMLGSRYKVFVDLFNLSTYLIPRHWIPKMN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51338 for 1398 contacts (-36.7/contact) +
2D Compatibility (PS) -22895 + (NN) -4826 + (LL) 564
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -86745.0 ( -62.05 by residue)
QMean score : 0.035
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