Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSITVSVDPVDPVDPVDPVDPVDAVVAAGSDGLTVARIE---SEIGALEF-------LNELRTELKSGQFRPQPVRERKIPK-----PGGLGKVR-RLGIPTVADRVVQAALKLVLEPIFETDFEPVSYGFRPARRAH---DTIAEIHLFGTQEYRWVLDADIKACFDRIDHADLMDRVRHRIKDKRVLRLVNWQRIRHRWNWTDVRRWLTDPTGRWHPISAD-GITLFNPAA-VPIRRYRYRGNTIPTPWTQAV |
| 4YAM Chain:A ((3-252)) | RNNTITLYDLQLESGCTISPYVWRTKYALKHKGFDIDIVPGGFTGILERTGGRSERVPVIVDDGEWVLDSWVIAEYLDEKYPDRPMLFEGPTQKNLMKFLDNWLWSTAVGPWFRCYILDYHDLSLPQDRDYVRWSREQWFLGGQRLEDVQAGREDRLPLVPPTLEPFRRILAETKWLGGDQPNFADYSALAVFLWTASVARTPPLTE----DDPLRDWLDRGFDLFDGLGRHPGMNPLFGLKLREGD-PEPFVRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24610 for 1663 contacts (14.8/contact) +
2D Compatibility (PS) -22859 + (NN) 369 + (LL) 788
1D Compatibility (HY) 6800 + (ID) 600
Total energy: 9108.0 ( 5.48 by residue)
QMean score : 0.018
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