Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVTTPSNHWGDERRKLSHQPPVRGQILGRRQARRLSQHFARVGVEAPPKRLQEMLLGAPAADEEWTDVKFALIVTQLNHEKRVAKFHRLQRRATHSLICLGLVLVALNFLICLAYIFFSLTQHAAAL
2EA9 Chain:A ((8-110))
-----MSNTTWGLQRDI---TPRLGARLVQEG--NQLHYLADRASITGKFSDAECPKLDV-VFPHFISQIESMLTTGELN-----PRHAQCVTLYHNGFTCEADTLGSCG------YVYIAVYPT----
General information:
TITO was launched using:
RESULT:
Template:
2EA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24406 for 734 contacts (-33.3/contact) +
2D Compatibility (PS) -10872 + (NN) 335 + (LL) 2772
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -35621.0 ( -48.53 by residue)
QMean score : 0.081
(partial model without unconserved sides chains):
PDB file :
Tito_2EA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EA9-query.scw
PDB file :
Tito_Scwrl_2EA9.pdb
: