Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPVETLHSGDPITDVNGGGQRYIVLESKTVG--DSCVVLELESRVNHQLQVIEKSFPAGYHVGRAHHRIL
2A1K Chain:A ((46-75))
---------------FKKNGKWYIETCSSTHGDYDSCPVCQYISK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A1K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1433 for 112 contacts (-12.8/contact) +
2D Compatibility (PS) -3276 + (NN) -3517 + (LL) 2632
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -7344.0 ( -65.57 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_2A1K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A1K-query.scw
PDB file :
Tito_Scwrl_2A1K.pdb
: