Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEVVTAAPAPPVVRLPPAVRGPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELG--NIQPNLSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLR-ETANWPQGQA-FATLPSMMHITLNAILRAIFGAGGSELDELRRLIPPWVTLGSRL--AALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRT--DVLALMLRSTYDDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDV--LAALVEEVDNGGHELRQAAIL-EVQRARTVIDFAARRVNPPVYQL----------GEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKPSPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
3GW9 Chain:A ((41-419)) | -------------------------------------------------FTINIVG-KRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRR-DPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165642 for 2778 contacts (-59.6/contact) +
2D Compatibility (PS) -39259 + (NN) -26064 + (LL) 5268
1D Compatibility (HY) -21600 + (ID) 4750
Total energy: -252047.0 ( -90.73 by residue)
QMean score : 0.395
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