Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
3BPX Chain:A ((37-134))
----------------------------------AQVACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIPLILKVEERWEDLLFRDFTEDERKLFRKMC-----------
General information:
TITO was launched using:
RESULT:
Template:
3BPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37227 for 610 contacts (-61.0/contact) +
2D Compatibility (PS) -10780 + (NN) -4716 + (LL) 3288
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -57235.0 ( -93.83 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3BPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPX-query.scw
PDB file :
Tito_Scwrl_3BPX.pdb
: