Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPD-------GKDLAILLLRLGRGRLGH
3RET Chain:A ((2-87))
--------------------KTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFEAS-EAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYI-----
General information:
TITO was launched using:
RESULT:
Template:
3RET.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5953 for 380 contacts (-15.7/contact) +
2D Compatibility (PS) -8687 + (NN) -5492 + (LL) 1380
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -21802.0 ( -57.37 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_3RET.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RET-query.scw
PDB file :
Tito_Scwrl_3RET.pdb
: