Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAA--EIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
4EW2 Chain:A ((1-186))
------------ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLS-RVKLAEHKIFPAALQLVAS-------------------
General information:
TITO was launched using:
RESULT:
Template:
4EW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139683 for 1461 contacts (-95.6/contact) +
2D Compatibility (PS) -20643 + (NN) -12093 + (LL) 1712
1D Compatibility (HY) -11200 + (ID) 3400
Total energy: -185307.0 ( -126.84 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4EW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EW2-query.scw
PDB file :
Tito_Scwrl_4EW2.pdb
: