Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGDCPRSRTVRWSWDTGHVTAEPQPTPRPAKPRLLQDGRDMFWSLAPLVVGCILLAGLVGMCSFQLGGTKRGPIPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRADPATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIHPSMYPTGTVDVGGTRWVVYEGSDENGAVEPVWTTRLTGPGGATQLAITGAGSIDQFRTLASATQSQPPLPAR |
2EXD Chain:A ((100-144)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------DHYLVEVEGDKWIAYSDEK-LSLGDRVMVVDVD----GLKLKVKRIPPQL------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -6293 for 223 contacts (-28.2/contact) +
2D Compatibility (PS) -5110 + (NN) -5152 + (LL) 6876
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -12829.0 ( -57.53 by residue)
QMean score : 0.213
|
|
|