Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALAPPVK-RQEQYRLEPHESAVRSGLDLAGFNKLADELEDEALLDATRRAR
2D41 Chain:A ((312-361))
--TMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPPGDPPQPEYDLE-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2D41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2071 for 211 contacts (9.8/contact) +
2D Compatibility (PS) -5034 + (NN) -62 + (LL) 2604
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -3321.0 ( -15.74 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_2D41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D41-query.scw
PDB file :
Tito_Scwrl_2D41.pdb
: