Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKS--VSAS-GDTLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
4HRO Chain:A ((2-87))
AHMEWKLFADLAEVAGS-RTVRVDVDGDATVGDALDALVGAHPALESRVFGDD--GELYDHINVLRNGEAAAL----GEATAAGDELALFPPV---
General information:
TITO was launched using:
RESULT:
Template:
4HRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64124 for 567 contacts (-113.1/contact) +
2D Compatibility (PS) -9173 + (NN) -3434 + (LL) -444
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -82875.0 ( -146.16 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_4HRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HRO-query.scw
PDB file :
Tito_Scwrl_4HRO.pdb
: