Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAPAICNTTETVHGIAT-SLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDPVREPALI
3B21 Chain:A ((21-212))
-----NVNVKKLLESLNSKSLGDMDKDSELAATLQKMIN-------------PSGGD----GNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRH-----LEQIDSEG--------IVSHPNETYSKFRERIAENILQN-TSKGSVVMISIEQ-----------------------ATHWIAGFNDGEKIMFL--DVQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC
General information:
TITO was launched using:
RESULT:
Template:
3B21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138362 for 1521 contacts (-91.0/contact) +
2D Compatibility (PS) -20123 + (NN) -2810 + (LL) 6416
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -161129.0 ( -105.94 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_3B21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B21-query.scw
PDB file :
Tito_Scwrl_3B21.pdb
: