Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTR-DGVAACPEMALILEEDDAD
1ROF Chain:A ((1-59))
MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVL----QPETDLPCAKDAADSCPTGAISVE-----
General information:
TITO was launched using:
RESULT:
Template:
1ROF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12930 for 421 contacts (-30.7/contact) +
2D Compatibility (PS) -5725 + (NN) -1758 + (LL) 464
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -23749.0 ( -56.41 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_1ROF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ROF-query.scw
PDB file :
Tito_Scwrl_1ROF.pdb
: