Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLTVADFALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAVATEDSSPTRVASYVVSGIGFLGGGVILREGFNVRGLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLGRPLGRLVDRDNAVEDEGLQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYAGEHAQAE |
2FGC Chain:A ((30-106)) | ----------------------------------------------------------------------------------------------------------------------------------------------------HLVSMLVHN--KPGVMRKVANLFARRGFNISSITVGESETP-GLSRLVIMVKGD-DKTIEQIEKQAYKLVEVVKVTPIDPL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54601 for 498 contacts (-109.6/contact) +
2D Compatibility (PS) -8511 + (NN) -5287 + (LL) 11464
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -60535.0 ( -121.56 by residue)
QMean score : 0.400
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